blast locally

2021 May 12th

Today I finished blasting localy using NCIB blast and Jupyter notebooks

!{bldir}blastx \
-query ../oliviacattau/blasts/hemat_transcriptome_v1.5.fasta \
-db ../oliviacattau/blasts/uniprot_sprot_2021_02  \
-out ../oliviacattau/blasts/analysis/hemat_transcriptome-uniprot_blastx.tab \
-evalue 1E-20 \
-num_threads 4 \
-max_target_seqs 1 \
-outfmt 6

Written on May 12, 2021