See previous posts for context:

• Part 3: https://github.com/ocattau/ocattau.github.io/blob/master/_posts/2021-10-21-functiongeneannotations.md
• Part 4: https://github.com/ocattau/ocattau.github.io/blob/master/_posts/2022-02-17-FApart4.md
• Upset Plots: https://github.com/ocattau/ocattau.github.io/blob/master/_posts/2022-03-11-FA6.md
• Circos Plots: https://github.com/ocattau/ocattau.github.io/blob/master/_posts/2022-03-16-circos.md (in progress)

Markdown file for organizing data before circos

Output files

• transcipt counts from kallisto output (SR) countMatrix
• Swiss Prot Uniprot Blast data (target_id, identifies and more….) blast_data
• Join identifiers by target_id pgenerosa_complete
• Went to Uniprot to grab go terms Uniprot Website
• Loaded go terms into gannet
• Left Joined pgenerosa_complete with uniprot_go_terms for master Pgenerosa_Protein file on Gannet