link from previous post
Note: I was using the wrong UpSet plot data format:: I redit this entire pipeline in the post from 03-11-22
Summary Data
| tissue |
TotalReadsN |
mean tpm |
Q4 tpm |
| ctenidia |
455026 |
90.4 |
21.8 |
| gonad |
251600 |
190.0 |
69.8 |
| heart |
424126 |
193.0 |
22.1 |
| juv_amb |
708616 |
165.0 |
24.1 |
| juv_sl |
712018 |
181.0 |
29 |
| larvae |
495025 |
107.0 |
25.1 |
Count Data (total unique genes per tissue type)
| heart |
gonad |
ctenidia |
juv_amb |
juv_sl |
larvae |
size |
| |
|
|
x |
|
|
194084 |
| |
|
|
|
x |
|
189123 |
| |
|
|
|
|
x |
123806 |
| x |
|
|
|
|
|
113179 |
| |
|
x |
|
|
|
111266 |
| |
x |
|
|
|
|
64841 |
| |
|
|
x |
x |
|
28083 |
| |
|
|
x |
|
x |
18172 |
Set Size (for UpSet plot)–note not the same as the count matrix aboove (~50% data not accounted for)
| tissue |
size |
| heart |
196832 |
| gonad |
111716 |
| ctenidia |
196188 |
| juv_amb |
318959 |
| juv_sl |
311908 |
| larvae |
216016 |
UpSet Plots
all intersections
two or less intersections
three or more intersections
